Our Team

Curtis Huttenhower
Principal Investigator
Email: chuttenh@hsph.harvard.edu
CV
Research Staff

Eric Franzosa
Senior Research Scientist
Email: franzosa@hsph.harvard.edu
CV

Kelsey Thompson
Research Associate
Email: kthompson@hsph.harvard.edu

Yancong Zhang
Research Scientist
Email: yancong@broadinstitute.org

Lea Wang
Research Associate
Email: leawang@hsph.harvard.edu

Sagun Maharjan
Software Developer
Email: smaharjan@hsph.harvard.edu

George Weingart
Software Developer
Email: george.weingart@gmail.com
Microbiome Analysis and Collection Cores

Xochitl Morgan
Microbiome Analysis Core Director, Senior Research Scientist
Email: xmorgan@hsph.harvard.edu

Lauren McIver
Associate Director of Engineering, Senior Software Developer
Email: lmciver@hsph.harvard.edu

Tom Kuntz
Postdoctoral Fellow
Email: tkuntz@hsph.harvard.edu

Steven Medina
Microbiome Collection Core Manager
Email: smedina@hsph.harvard.edu
Students

Marina Chen
PhD student, joint with Jack Spengler
Email: dichen@hsph.harvard.edu

Tobyn Branck
PhD Student, Systems Biology
Email: tobynbranck@g.harvard.edu

Will Nickols
Undergraduate Student
Email: willnickols@college.harvard.edu

Jordan Jensen
PhD student, Biological Sciences in Public Heath
Email: jordanjensen@g.harvard.edu

Veronica Perdomo
Undergraduate Student, BPH SIP Program
Email: vperdomo@mit.edu

Zhiji Hu
MS student, Environmental Health
Email: zhijihu@hsph.harvard.edu

Theresa Wilkat
PhD Student, Kiel University & Institute of Medical Informatics and Statistics (UKSH)
Email: wilkat@medinfo.uni-kiel.de
Postdoctoral Fellows

Amrisha Bhosle
Postdoctoral Fellow
Email: abhosle@broadinstitute.org

Zhendong Mei
Postdoctoral fellow, joint with Daniel Wang
Email: nhzme@channing.harvard.edu

Philipp Muench
Postdoctoral Fellow, joint with Alice McHardy
Email: philipp.muench@helmholtz-hzi.de

Connor Geraghty
Research Fellow, joint with Andrew T. Chan
Email: cgeraghty@mgh.harvard.edu

Sena Bae
Postdoctoral Fellow, joint with Wendy Garrett
Email: sbae@hsph.harvard.edu

Yiqing Wang
Postdoctoral Fellow, joint with Andrew T. Chan
Email: ywang123@mgh.harvard.edu

Hanseul Kim
Postdoctoral fellow, joint with Long Nguyen

Etienne Nzabarushimana
Postdoctoral fellow, joint with Long Nguyen
Email: enzabarushimana@mgh.harvard.edu

Chaoran Ma
Postdoctoral fellow, joint with Daniel Wang
Email: cma12@bwh.harvard.edu

Katia Chadaideh
Postdoctoral fellow, joint with Long Nguyen
Email: enzabarushimana@mgh.harvard.edu

Prioty Sarwar
Postdoctoral fellow, joint with Vanja Klepac-Ceraj
Email: psarwar@wellesley.edu

Kai Wang
Postdoctoral fellow, joint with Mingyang Song

Kelly Eckenrode
Postdoctoral fellow, joint with Levi Waldron
Email: kelly.eckenrode@sph.cuny.edu

Paul Nelson
Postdoctoral fellow, joint with Empress Therapeutics
Email: pnelson@empresstx.com

Fenglei Wang
Postdoctoral fellow, joint with Daniel Wang
Email: fengleiwang@g.harvard.edu

Danyue Dong
Postdoctoral fellow, joint with Daniel Wang
Email: nhddg@channing.harvard.edu

Andrew Ghazi
Postdoctoral fellow
Email: aghazi@broadinstitute.org

Guilherme Fahur Bottino
Postdoctoral fellow, joint with Vanja Klepac-Ceraj
Email: gz101@wellesley.edu
Lab Affiliates

Raaj Mehta
Associate Medical Director, Clinical Development at Vertex Pharmaceuticals
Email: rmehta2@mgh.harvard.edu

Wenjie Ma
Instructor of Medicine, MGH and HMS,
joint with Andrew T. Chan
Email: wem692@mail.harvard.edu

Daniel (Dong) Wang
Assistant Professor at Harvard Medical School and Brigham and Women’s Hospital
Email: dow471@mail.harvard.edu

Long Nguyen
Assistant Professor at MGH and HMS
Email: lnguyen24@mgh.harvard.edu
First name | Last name | Role | Start date | End date | Joint | Visitors | |
---|---|---|---|---|---|---|---|
Sunjeong | Bae | sjbae@hsph.harvard.edu | MS student | 10/17/2022 | 04/01/2023 | ||
Meg | Short | mshort@broadinstitute.org | Postdoctoral fellow | 12/7/2020 | 04/01/2023 | ||
Ronnie | Perdomo | vperdomo@mit.edu | Undergraduate student | 6/6/2022 | 04/01/2023 | ||
Rahul | Unni | unni@evolbio.mpg.de | PhD student | 11/7/2022 | 04/01/2023 | ||
Yan | Yan | yyan@hsph.harvard.edu | Postdoctoral fellow | 2/1/2017 | 8/19/2022 | ||
Agathe | Grisard | agrisard@stanford.edu | MS student | 3/7/2022 | 9/2/2022 | ||
Raven | Chen | ychen3@hsph.harvard.edu | PhD student | 6/1/2022 | 10/14/2022 | ||
Alba | Troci | a.troci@ikmb.uni-kiel.de | PhD student | 8/1/2022 | 9/30/2022 | ||
Kristine | Davis | kristinekay.dennis@gmail.com | Postdoctoral fellow | 1/25/2021 | 8/2/2022 | Daniel Wang | |
Hannah | VanEvery | hvanevery@mgh.harvard.edu | Postdoctoral fellow | 11/1/2021 | 7/8/2022 | ||
Magnus | Stefansson | mstefansson@hsph.harvard.edu | Research scientist | 3/7/2022 | 8/15/2022 | ||
Sanjana | Kulkarni | skulkarni@g.harvard.edu | Rotating PHD student, Virology | 2/28/2022 | 7/2/2022 | ||
Xueying(Sonia) | Huang | xueying_huang@hsph.harvard.edu | Masters Student, Computational Biology and Quantitative Genetics | 9/6/2021 | 7/2/2022 | ||
Brad | James | bjames@hsph.harvard.edu | Microbiome Collection Core Director | 3/7/2022 | 4/20/2022 | ||
April | Pawluk | apawluk@hsph.harvard.edu | Strategic Program Manager | 4/6/2021 | 2/28/2022 | ||
Arpan | Sarkar | arpan_sarkar@g.harvard.edu | Rotating PhD student, Biostatistics | 8/30/2021 | 12/17/2021 | ||
Paulo | Manrique | paulomanrique@g.harvard.edu | Rotating PhD student, Biological Sciences in Public Heath | 10/4/2021 | 12/17/2021 | ||
Aaron | Walsh | walsha@broadinstitute.org | Postdoctoral fellow | 3/2/2020 | 11/19/2021 | ||
Brandon | Burdette | bburdette@hsph.harvard.edu | Microbiome Collection Core Manager | 8/16/2021 | 11/15/2021 | ||
Cherry | Li | chengchenli@hsph.harvard.edu | Microbiome Collection Core Manager | 9/30/2019 | 9/30/2021 | ||
Jeremy | Wilkinson | jewilkinson@hsph.harvard.edu | Microbiome Analysis Core Director | 3/1/2018 | 9/10/2021 | ||
Hera | Vlamakis | hera@broadinstitute.org | Group Leader, Broad Institute | 7/1/2015 | 8/6/2021 | Ramnik Xavier | |
Elizabeth | Perez | eperez@g.harvard.edu | PhD student | 1/12/2021 | 6/11/2021 | Seth Rakoff-Nahoum | ✅ |
Emma | Accorsi | eaccorsi@g.harvard.edu | PhD Student, Population Health Sciences | 11/1/2016 | 07/15/2021 | Marc Lipsitch | |
Dawn | Chen | dawnchen@fas.harvard.edu | Rotator | 10/13/2020 | 12/18/2020 | ||
Siyuan | Ma | sim653@mail.harvard.edu | Postdoctoral fellow | 12/1/2013 | 8/31/2020 | ||
Kathleen | Sucipto | Kathleen_Sucipto@hms.harvard.edu | MS student | 5/18/2020 | 8/31/2020 | ||
Maddy | Kline | klinem@mit.edu | Rotator | 7/1/2020 | 7/31/2020 | ||
Dmitry | Shungin | dshungin@broadinstitute.org | Postdoctoral fellow | 11/1/2016 | 6/30/2020 | Ramnik Xavier | |
Luli | Zou | zou@g.harvard.edu | PhD student | 1/27/2020 | 5/15/2020 | ✅ | |
Erica | Normandin | ericanormandin@g.harvard.edu | PhD student | 3/23/2020 | 5/15/2020 | Wendy Garrett | ✅ |
Melanie | Schirmer | melanie@broadinstitute.org | Research associate | 1/1/2015 | 2/4/2020 | Ramnik Xavier | |
Sharifa | Sahai | sharifasahai@g.harvard.edu | PhD student | 1/7/2020 | 1/15/2020 | ✅ | |
Mondher | Khdhiri | mkhdhiri@broadinstitute.org | Postdoctoral fellow | 8/26/2019 | 10/25/2019 | ||
Brantley | Hall | brantley@broadinstitute.org | Postdoctoral fellow | 6/1/2016 | 10/1/2019 | Ramnik Xavier | |
Danylo | Lavrentovich | dlavrent@g.harvard.edu | Rotator | 7/22/2019 | 8/30/2019 | ||
Tommi | Vatanen | vatanen@broadinstitute.org | Senior Research Fellow | 11/1/2013 | 5/31/2019 | Liggins Institute | |
Ana | Mailyan | ana.mailyan@gmail.com | Software developer | 8/1/2018 | 5/31/2019 | ||
Jingjing | Tang | jtang@hsph.harvard.edu | MS student | 6/1/2018 | 4/30/2019 | ||
Himel | Mallick | himel.mallick@merck.com | Postdoctoral fellow | 10/5/2015 | 3/3/2019 | ||
Jason | Lloyd-Price | jason.lloydprice@gmail.com | Postdoctoral fellow | 10/26/2015 | 2/21/2019 | ||
Kevin | Bonham | kbonham@wellesley.edu | Postdoctoral fellow | 6/1/2017 | 2/1/2019 | ||
Shimin | Bi | shiminbi@hsph.harvard.edu | MS student | 2/1/2018 | 12/31/2018 | ||
Casey | DuLong | caseydulong@gmail.com | Technician | 10/1/2014 | 12/31/2018 | ||
Cesar | Arze | cesar.arze@gmail.com | Software developer | 1/1/2017 | 12/31/2018 | ||
Jim | Kaminski | jimkaminski@berkeley.edu | MS student | 2/1/2012 | 9/30/2018 | ||
Bahar | Sayoldin | sayoldin@broadinstitute.org | Project manager | 10/1/2015 | 9/30/2018 | ||
Danielle | Peterson | Undergraduate | 6/1/2018 | 8/31/2018 | Vanja Klepac-Ceraj | ||
Moran | Yassour | Moran.Yassour@mail.huji.ac.il | Postdoctoral fellow | 8/1/2012 | 8/31/2018 | Ramnik Xavier | |
Yilin | Yin | yin.yil@husky.neu.edu | Postbaccalaureate | 5/1/2018 | 8/31/2018 | ||
Ali | Rahnavard | rahnavard@gwu.edu | Postdoctoral fellow | 5/1/2014 | 8/31/2018 | ||
Lauren | Tso | Undergraduate | 6/1/2018 | 8/31/2018 | Vanja Klepac-Ceraj | ||
Jonathan | Thorsen | jonathan.thorsen@dbac.dk | PhD student | 6/1/2018 | 6/30/2018 | Morten Rasmussen | ✅ |
Stefan | Halvorsen | stefan_halvorsen@g.harvard.edu | Rotator | 4/1/2018 | 6/30/2018 | ||
Jane | Liang | jwliang@g.harvard.edu | Rotator | 2/1/2018 | 5/31/2018 | ||
Galeb | Abu-Ali | abualiga@gmail.com | Research scientist | 3/1/2014 | 3/31/2018 | ||
John | Miller | johnjoshuamiller@college.harvard.edu | Undergraduate | 10/1/2017 | 12/31/2017 | ||
Madalyn | Mcfarland | mcfarland@g.harvard.edu | Rotator | 9/1/2017 | 12/31/2017 | ||
Tiffany | Hsu | tyhsu389@gmail.com | PhD student | 9/1/2013 | 10/31/2017 | ||
Koji | Yasuda | kyasuda@kintaitx.com | PhD student | 1/1/2013 | 9/30/2017 | ||
Emma | Schwager | emma.schwager@gmail.com | PhD student | 5/1/2013 | 9/30/2017 | ||
Kayleigh | Rutherford | kayrut92@bu.edu | Postbaccalaureate | 5/1/2017 | 8/31/2017 | ||
Michael | Barbini | mbarbini@broadinstitute.org | High school | 6/1/2017 | 8/31/2017 | ||
Chrystal | Chan | chc708@mail.harvard.edu | MS student | 4/1/2016 | 5/31/2017 | ||
Boyu | Ren | boyuren158@gmail.com | PhD student | 11/1/2012 | 5/31/2017 | ||
Allison | Hicks | allison_hicks@g.harvard.edu | Rotator | 1/1/2017 | 3/31/2017 | ||
Tsubasa | Watabe | tsu313@sfc.keio.ac.jp | MS student | 1/1/2017 | 1/31/2017 | ||
Simon | Chang | Simon_Chang@hms.harvard.edu | Software developer | 8/1/2016 | 1/31/2017 | ||
Raivo | Kolde | rkolde@gmail.com | Postdoctoral fellow | 7/1/2015 | 12/31/2016 | Ramnik Xavier | |
Randall | Schwager | randall.schwager@gmail.com | Software developer | 9/16/2013 | 11/30/2016 | ||
Chengwei | Luo | erosionvia@gmail.com | Postdoctoral fellow | 10/1/2013 | 10/31/2016 | Ramnik Xavier | |
Jacob | Luber | jluber@g.harvard.edu | Rotator | 7/1/2016 | 9/30/2016 | ||
Isabelle | O'Bryon | igo8214@rit.edu | Undergraduate | 6/1/2016 | 8/31/2016 | ||
Avi | Swartz | aswartz@broadinstitute.org | High school | 6/1/2016 | 8/31/2016 | ||
Louise | Thingholm | l.thingholm@ikmb.uni-kiel.de | PhD student | 5/1/2016 | 7/31/2016 | Andre Franke | ✅ |
Alex | Kostic | aleksandar.kostic@joslin.harvard.edu | Postdoctoral fellow | 6/1/2013 | 7/31/2016 | Ramnik Xavier | |
Alexandra | Sirota-Madi | sirota.alexandra@gmail.com | Postdoctoral fellow | 2/1/2014 | 7/31/2016 | Ramnik Xavier | |
Morten | Rasmussen | morten.arendt@dbac.dk | Principal investigator | 11/1/2015 | 6/30/2016 | ✅ | |
Lana | Awad | lana.awad90@gmail.com | MS student | 1/1/2016 | 5/31/2016 | ||
Andy | Shi | andyshi@college.harvard.edu | Undergraduate | 2/1/2014 | 3/31/2016 | ||
Yong | Lee | yonglee@college.harvard.edu | Undergraduate | 8/1/2015 | 12/31/2015 | ||
Ayshwarya | Subramanian | ayshwaryasubramanian@gmail.com | Postdoctoral fellow | 6/1/2014 | 11/30/2015 | ||
Xochitl | Morgan | xochitl.morgan@otago.ac.nz | Research scientist | 9/1/2011 | 10/31/2015 | ||
Minah | Iqbal | minahiqbal1990@gmail.com | Project manager | 8/1/2015 | 9/30/2015 | ||
Luc | Bijnens | LBIJNENS@its.jnj.com | Principal investigator | 5/1/2015 | 8/31/2015 | ✅ | |
Enrico | Micali | riomicali@gmail.com | High school | 6/1/2015 | 8/31/2015 | ||
Keith | Bayer | kbayer@hsph.harvard.edu | Software developer | 9/1/2013 | 7/31/2015 | ||
Afrah | Shafquat | afrah.shafquat@gmail.com | Project manager | 7/1/2013 | 7/31/2015 | ||
Georgina | Hold | georgina.hold@unsw.edu.au | Principal investigator | 10/1/2014 | 6/30/2015 | Wendy Garrett | ✅ |
Jingyuan | Fu | fjingyuan@gmail.com | Principal investigator | 2/1/2015 | 2/28/2015 | Ramnik Xavier | ✅ |
Muneeza | Patel | muneezap@mit.edu | Undergraduate | 1/1/2015 | 2/28/2015 | ||
Dirk | Gevers | dgevers3@its.jnj.com | Research scientist | 4/1/2010 | 1/31/2015 | Ramnik Xavier | |
Regina | Joice | rejoice06@gmail.com | Postdoctoral fellow | 7/1/2013 | 1/31/2015 | ||
Jessica | Lau | jlau@g.harvard.edu | Rotator | 9/1/2014 | 12/31/2014 | ||
Kevin | Oh | keunyoung.oh@creditkarma.com | MS student | 12/1/2012 | 11/30/2014 | ||
Soumya | Banerjee | neel.soumya@gmail.com | Postdoctoral fellow | 1/1/2014 | 9/30/2014 | ||
Gerrod | Voigt | gvoigt@mit.edu | Undergraduate | 5/1/2014 | 9/30/2014 | ||
Kathryn | Winglee | kwinglee@jhmi.edu | PhD student | 6/1/2014 | 8/31/2014 | Bill Bishai | ✅ |
Joseph | Moon | moon.yosup@gmail.com | Postbaccalaureate | 3/1/2012 | 8/31/2014 | ||
Floris | Imhann | florisimhann@gmail.com | PhD student | 7/7/2014 | 8/22/2014 | Rinse Weersma | ✅ |
Shirlee | Wohl | shirleewohl@fas.harvard.edu | Rotator | 4/1/2014 | 6/30/2014 | ✅ | |
Puneet | Puri | puneet.puri@vcuhealth.org | Principal investigator | 4/14/2014 | 4/18/2014 | ||
Tim | Tickle | ttickle@broadinstitute.org | Postdoctoral fellow | 1/1/2012 | 2/28/2014 | ||
Anna | Green | anna.g.green@gmail.com | Rotator | 12/1/2013 | 2/28/2014 | ||
Wesley | Wong | wesleywong@fas.harvard.edu | Rotator | 10/1/2013 | 12/31/2013 | ||
Fah | Sathirapongsasuti | fah@cs.stanford.edu | PhD student | 2/1/2012 | 11/30/2013 | John Quackenbush | |
Craig | Bielski | cbielski@hsph.harvard.edu | MS student | 10/1/2012 | 11/30/2013 | ||
Sydney | Lavoie | sydneylavoie@hsph.harvard.edu | Rotator | 7/1/2013 | 9/30/2013 | ||
Taylor | Friedman | tfriedma@hamilton.edu | Undergraduate | 3/1/2013 | 8/31/2013 | ||
Roman | Stolyarov | r.m.stolyarov@gmail.com | Undergraduate | 7/1/2013 | 8/31/2013 | ||
Morgan | Paull | mpaull15@gmail.com | Undergraduate | 6/1/2013 | 8/31/2013 | ||
Michelle | Archuleta | archulet@broadinstitute.org | Postdoctoral fellow | 7/1/2012 | 7/31/2013 | Ramnik Xavier | |
Daniela | Boernigen | daniela.nitsch@gmail.com | Postdoctoral fellow | 1/1/2012 | 7/31/2013 | ||
Levi | Waldron | lwaldron.research@gmail.com | Postdoctoral fellow | 1/1/2012 | 7/31/2013 | ||
Alyx | Shubert | ALYXSCHUBERT@GMAIL.COM | PhD student | 6/1/2013 | 6/30/2013 | Pat Schloss | ✅ |
Yiren | Lu | ylu@college.harvard.edu | Undergraduate | 9/1/2012 | 6/30/2013 | ||
Kevin | Lee | zephirum@gmail.com | PhD student | 6/17/2013 | 6/21/2013 | Xochitl Morgan | ✅ |
Yvonne | Hua | yhua@fas.harvard.edu | Rotator | 3/1/2013 | 5/31/2013 | ||
Vagheesh | Narasimhan | vagheesh@mail.harvard.edu | MS student | 1/1/2012 | 5/31/2013 | ||
Felix | Wong | fwong@college.harvard.edu | Undergraduate | 11/1/2012 | 5/31/2013 | ||
Brian | Palmer | bmp.hsph@gmail.com | Software developer | 9/1/2012 | 5/31/2013 | ||
Mi Young | Lim | lmy0402@snu.ac.kr | PhD student | 1/1/2013 | 4/30/2013 | Gwangpyo Ko | ✅ |
Hyun Sun | Yun | ghostboat80@gmail.com | Postdoctoral fellow | 1/1/2013 | 4/30/2013 | Gwangpyo Ko | ✅ |
Joshua | Reyes | jreyes@fas.harvard.edu | Rotator | 1/1/2012 | 4/30/2013 | ||
Jean | Huang | Jean.Huang@olin.edu | Principal investigator | 4/15/2013 | 4/19/2013 | ✅ | |
David | Gootenberg | david_gootenberg@hms.harvard.edu | Rotator | 1/1/2013 | 2/20/2013 | ||
Kasia | Baranowski | baranowski@fas.harvard.edu | Rotator | 11/1/2012 | 1/31/2013 | ||
Yael | Haberman | Yael.Haberman@cchmc.org | Clinical fellow | 12/3/2012 | 12/7/2012 | Ted Denson | ✅ |
Nicola | Segata | nicola.segata@unitn.it | Postdoctoral fellow | 6/1/2010 | 11/30/2012 | ||
Ben | Ganzfried | benganzfried@post.harvard.edu | Postbaccalaureate | 10/15/2010 | 9/30/2012 | ||
Jovian | Yu | jovian@brown.edu | Postbaccalaureate | 2/1/2012 | 8/31/2012 | ||
Bing | Ma | igs.bma@gmail.com | Postdoctoral fellow | 6/4/2012 | 6/8/2012 | Jacques Ravel | ✅ |
Pinaki | Sarder | pinakisa@buffalo.edu | Postdoctoral fellow | 4/1/2010 | 3/31/2011 | ||
Larisa | Miropolsky | larisa.miropolsky@gmail.com | Software developer | 10/1/2010 | 2/28/2011 | ||
Willythssa | Pierre-Louis | willythssa.pl@gmail.com | Undergraduate | 6/1/2010 | 8/31/2010 | ||
Jacob | Pritt | jacobpritt@gmail.com | Undergraduate | 2/1/2010 | 5/31/2010 | ||
Yoolee | Shin | yshin@fas.harvard.edu | MS student | 1/1/2010 | 5/31/2010 | ||
Amy | Tai | atai@college.harvard.edu | Undergraduate | 12/1/2009 | 3/31/2010 |